IPyNiiVue Documentation¶
A Jupyter Widget for Niivue based on anywidget.
Contents:
- Installation
- API Documentation
NiiVueNiiVue.__init__()NiiVue.add_colormap()NiiVue.add_mesh()NiiVue.add_volume()NiiVue.background_masks_overlaysNiiVue.clip_plane_depth_azi_elevNiiVue.close()NiiVue.close_drawing()NiiVue.colormap_from_key()NiiVue.colormaps()NiiVue.draw_fill_overwritesNiiVue.draw_grow_cut()NiiVue.draw_lutNiiVue.draw_opacityNiiVue.draw_otsu()NiiVue.draw_undo()NiiVue.get_mesh_index_by_id()NiiVue.get_volume_index_by_id()NiiVue.graphNiiVue.heightNiiVue.load_drawing()NiiVue.load_mat_cap_texture()NiiVue.load_meshes()NiiVue.load_volumes()NiiVue.mesh_shader_names()NiiVue.meshesNiiVue.move_crosshair_in_vox()NiiVue.on_azimuth_elevation_change()NiiVue.on_click_to_segment()NiiVue.on_clip_plane_change()NiiVue.on_document_loaded()NiiVue.on_drag_release()NiiVue.on_frame_change()NiiVue.on_hover_idx_change()NiiVue.on_image_loaded()NiiVue.on_intensity_change()NiiVue.on_location_change()NiiVue.on_mesh_added_from_url()NiiVue.on_mesh_loaded()NiiVue.on_mouse_up()NiiVue.on_volume_added_from_url()NiiVue.on_volume_updated()NiiVue.optsNiiVue.overlay_alpha_shaderNiiVue.overlay_outline_widthNiiVue.remove_haze()NiiVue.save_document()NiiVue.save_html()NiiVue.save_image()NiiVue.save_scene()NiiVue.sceneNiiVue.set_atlas_outline()NiiVue.set_clip_plane()NiiVue.set_colormap()NiiVue.set_crosshair_color()NiiVue.set_crosshair_width()NiiVue.set_draw_colormap()NiiVue.set_drawing_enabled()NiiVue.set_gamma()NiiVue.set_high_resolution_capable()NiiVue.set_interpolation()NiiVue.set_mesh_layer_property()NiiVue.set_mesh_property()NiiVue.set_mesh_shader()NiiVue.set_modulation_image()NiiVue.set_multiplanar_pad_pixels()NiiVue.set_opacity()NiiVue.set_pen_value()NiiVue.set_radiological_convention()NiiVue.set_render_azimuth_elevation()NiiVue.set_selection_box_color()NiiVue.set_slice_mm()NiiVue.set_slice_type()NiiVue.set_volume_render_illumination()NiiVue.volumes
VolumeVolume.__init__()Volume.cal_maxVolume.cal_minVolume.colorbar_visibleVolume.colormapVolume.colormap_invertVolume.colormap_labelVolume.colormap_negativeVolume.dataVolume.dimsVolume.frame_4dVolume.get_state()Volume.hdrVolume.idVolume.imgVolume.modulate_alphaVolume.modulation_imageVolume.n_frame_4dVolume.nameVolume.opacityVolume.paired_img_dataVolume.paired_img_pathVolume.paired_img_urlVolume.pathVolume.save_to_disk()Volume.set_colormap_label()Volume.set_colormap_label_from_url()Volume.url
MeshMesh.__init__()Mesh.colorbar_visibleMesh.colormapMesh.colormap_invertMesh.dataMesh.fiber_colorMesh.fiber_decimation_strideMesh.fiber_ditherMesh.fiber_lengthMesh.fiber_radiusMesh.get_state()Mesh.idMesh.layersMesh.mesh_shader_indexMesh.nameMesh.opacityMesh.pathMesh.ptsMesh.rgba255Mesh.trisMesh.urlMesh.visible
MeshLayerMeshLayer.__init__()MeshLayer.cal_maxMeshLayer.cal_minMeshLayer.colorbar_visibleMeshLayer.colormapMeshLayer.colormap_invertMeshLayer.colormap_negativeMeshLayer.dataMeshLayer.frame_4dMeshLayer.idMeshLayer.nameMeshLayer.opacityMeshLayer.outline_borderMeshLayer.pathMeshLayer.urlMeshLayer.use_negative_cmap
- Options
ConfigOptionsConfigOptions.__init__()ConfigOptions.atlas_active_indexConfigOptions.atlas_outlineConfigOptions.back_colorConfigOptions.center_mosaicConfigOptions.click_to_segmentConfigOptions.click_to_segment_auto_intensityConfigOptions.click_to_segment_brightConfigOptions.click_to_segment_intensity_maxConfigOptions.click_to_segment_intensity_minConfigOptions.click_to_segment_is_2dConfigOptions.click_to_segment_max_distance_mmConfigOptions.click_to_segment_percentConfigOptions.click_to_segment_radiusConfigOptions.clip_plane_colorConfigOptions.clip_plane_hot_keyConfigOptions.clip_thickConfigOptions.clip_volume_highConfigOptions.clip_volume_lowConfigOptions.colorbar_heightConfigOptions.colorbar_marginConfigOptions.colorbar_widthConfigOptions.crosshair_colorConfigOptions.crosshair_gapConfigOptions.crosshair_widthConfigOptions.crosshair_width_unitConfigOptions.double_touch_timeoutConfigOptions.drag_and_drop_enabledConfigOptions.drag_modeConfigOptions.drag_mode_primaryConfigOptions.drawing_enabledConfigOptions.flood_fill_neighborsConfigOptions.font_colorConfigOptions.font_min_pxConfigOptions.font_size_scalingConfigOptions.force_device_pixel_ratioConfigOptions.gradient_amountConfigOptions.gradient_opacityConfigOptions.gradient_orderConfigOptions.hero_image_fractionConfigOptions.hero_slice_typeConfigOptions.interactiveConfigOptions.invert_scroll_directionConfigOptions.is_2d_slice_shaderConfigOptions.is_additive_blendConfigOptions.is_alpha_clip_darkConfigOptions.is_anti_aliasConfigOptions.is_colorbarConfigOptions.is_corner_orientation_textConfigOptions.is_depth_pick_meshConfigOptions.is_filled_penConfigOptions.is_force_mouse_click_to_voxel_centersConfigOptions.is_nearest_interpolationConfigOptions.is_orient_cubeConfigOptions.is_orientation_text_visibleConfigOptions.is_radiological_conventionConfigOptions.is_resize_canvasConfigOptions.is_rulerConfigOptions.is_slice_mmConfigOptions.is_v1_slice_shaderConfigOptions.key_debounce_timeConfigOptions.legend_background_colorConfigOptions.legend_text_colorConfigOptions.limit_frames_4dConfigOptions.loading_textConfigOptions.log_levelConfigOptions.long_touch_timeoutConfigOptions.max_draw_undo_bitmapsConfigOptions.measure_line_colorConfigOptions.measure_text_colorConfigOptions.measure_text_heightConfigOptions.measure_text_justifyConfigOptions.mesh_thickness_on_2dConfigOptions.mesh_xrayConfigOptions.multiplanar_equal_sizeConfigOptions.multiplanar_force_renderConfigOptions.multiplanar_layoutConfigOptions.multiplanar_pad_pixelsConfigOptions.multiplanar_show_renderConfigOptions.pen_sizeConfigOptions.pen_valueConfigOptions.render_overlay_blendConfigOptions.render_silhouetteConfigOptions.ruler_colorConfigOptions.ruler_widthConfigOptions.sagittal_nose_leftConfigOptions.scroll_requires_focusConfigOptions.selection_box_colorConfigOptions.selection_box_is_outlineConfigOptions.selection_box_line_thicknessConfigOptions.show_3d_crosshairConfigOptions.show_colorbar_borderConfigOptions.show_legendConfigOptions.show_measure_unitsConfigOptions.slice_mosaic_stringConfigOptions.slice_typeConfigOptions.text_heightConfigOptions.thumbnailConfigOptions.tile_marginConfigOptions.trust_cal_min_maxConfigOptions.view_mode_hot_keyConfigOptions.yoke_3d_to_2d_zoom
- Traits
ColorMapLUTGraphGraph.__init__()Graph.auto_size_multiplanarGraph.back_colorGraph.grid_line_thicknessGraph.is_range_cal_min_maxGraph.line_alphaGraph.line_colorGraph.line_rgbGraph.line_thicknessGraph.linesGraph.ltwhGraph.normalize_valuesGraph.opacityGraph.plot_ltwhGraph.selected_columnGraph.text_colorGraph.vols
- Enums
- Contributing